WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W01B11.2b.1 Sequence Name  W01B11.2b.1
Length (nt)  3402   Chromosome Location  I: 3287372-3293170
Chromosome . Primary Identifier  I Chromosome Location . Start  3287372
Chromosome Location . End  3293170 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01B11.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020914 sulp-6 W01B11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W01B11.2b W01B11.2b 321   I: 3292694-3292765

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W01B11.2b.1 3287372 3293170 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon6386   151   I: 3287372-3287522 Caenorhabditis elegans
Exon6388   70   I: 3287684-3287753 Caenorhabditis elegans
Exon6390   226   I: 3288308-3288533 Caenorhabditis elegans
Exon6392   1928   I: 3288585-3290512 Caenorhabditis elegans
Exon6395   107   I: 3291268-3291374 Caenorhabditis elegans
Exon6397   185   I: 3291494-3291678 Caenorhabditis elegans
Exon6399   99   I: 3291727-3291825 Caenorhabditis elegans
Exon6401   105   I: 3291906-3292010 Caenorhabditis elegans
Exon6403   108   I: 3292402-3292509 Caenorhabditis elegans
Exon6406   131   I: 3292635-3292765 Caenorhabditis elegans
Exon6408   106   I: 3292809-3292914 Caenorhabditis elegans
Exon6410   186   I: 3292985-3293170 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W01B11.2b.1 3287372 3293170 1

1 Sequence

Length
3402

1 Sequence Ontology Term

Identifier Name Description
transcript