WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y44E3A.3.1 Sequence Name  Y44E3A.3.1
Length (nt)  410   Chromosome Location  I: 3317978-3318584
Chromosome . Primary Identifier  I Chromosome Location . Start  3317978
Chromosome Location . End  3318584 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y44E3A.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021548 trx-4 Y44E3A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y44E3A.3 Y44E3A.3 324   I: 3318055-3318286

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y44E3A.3.1 3317978 3318584 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon6440   309   I: 3317978-3318286 Caenorhabditis elegans
Exon6441   101   I: 3318484-3318584 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y44E3A.3.1 3317978 3318584 -1

1 Sequence

Length
410

1 Sequence Ontology Term

Identifier Name Description
transcript