WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y44E3A.4 Sequence Name  Y44E3A.4
Length (nt)  1656   Chromosome Location  I: 3319853-3320022
Chromosome . Primary Identifier  I Chromosome Location . Start  3319853
Chromosome Location . End  3320022
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y44E3A.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48147 CDAP-2 58.4 551 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00056558
WBRNAi00056559
WBRNAi00004616
WBRNAi00004617
WBRNAi00109557
WBRNAi00037078
WBRNAi00109168
WBRNAi00109266
WBRNAi00109460
WBRNAi00109363
WBRNAi00117102

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y44E3A.4 3319853 3320022 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021549 cdap-2 Y44E3A.4 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y44E3A.4 3319853 3320022 -1
CDS:Y44E3A.4 3320971 3321193 -1
CDS:Y44E3A.4 3322146 3322352 -1
CDS:Y44E3A.4 3323659 3323823 -1
CDS:Y44E3A.4 3326509 3326730 -1
CDS:Y44E3A.4 3327878 3328081 -1
CDS:Y44E3A.4 3328693 3329036 -1
CDS:Y44E3A.4 3329840 3329942 -1
CDS:Y44E3A.4 3330594 3330611 -1

1 Sequence

Length
1656

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y44E3A.4.1 Y44E3A.4.1 2741   I: 3318830-3330673