WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y44E3A.1a.1 Sequence Name  Y44E3A.1a.1
Length (nt)  665   Chromosome Location  I: 3338367-3340225
Chromosome . Primary Identifier  I Chromosome Location . Start  3338367
Chromosome Location . End  3340225 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y44E3A.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021547 Y44E3A.1 Y44E3A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y44E3A.1a Y44E3A.1a 465   I: 3338367-3338519

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y44E3A.1a.1 3338367 3340225 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon6451   153   I: 3338367-3338519 Caenorhabditis elegans
Exon6453   75   I: 3339130-3339204 Caenorhabditis elegans
Exon6456   101   I: 3339674-3339774 Caenorhabditis elegans
Exon6458   70   I: 3339839-3339908 Caenorhabditis elegans
Exon6465   266   I: 3339960-3340225 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y44E3A.1a.1 3338367 3340225 1

1 Sequence

Length
665

1 Sequence Ontology Term

Identifier Name Description
transcript