WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y44E3A.6b Sequence Name  Y44E3A.6b
Length (nt)  2532   Chromosome Location  I: 3340559-3340605
Chromosome . Primary Identifier  I Chromosome Location . Start  3340559
Chromosome Location . End  3340605
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y44E3A.6b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31373 EDC-4, isoform b 94.8 843 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00007431
WBRNAi00056560
WBRNAi00004618
WBRNAi00116540
WBRNAi00117879

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y44E3A.6b 3340559 3340605 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021551 edc-4 Y44E3A.6 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y44E3A.6b 3340559 3340605 -1
CDS:Y44E3A.6b 3340648 3340755 -1
CDS:Y44E3A.6b 3342218 3342626 -1
CDS:Y44E3A.6b 3343334 3343623 -1
CDS:Y44E3A.6b 3344573 3345010 -1
CDS:Y44E3A.6b 3345438 3345570 -1
CDS:Y44E3A.6b 3346488 3347015 -1
CDS:Y44E3A.6b 3348133 3348271 -1
CDS:Y44E3A.6b 3348334 3348446 -1
CDS:Y44E3A.6b 3348492 3348620 -1
CDS:Y44E3A.6b 3349617 3349764 -1
CDS:Y44E3A.6b 3349842 3349891 -1

1 Sequence

Length
2532

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y44E3A.6b.1 Y44E3A.6b.1 2900   I: 3340214-3349914