WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W05F2.4b.1 Sequence Name  W05F2.4b.1
Length (nt)  2841   Chromosome Location  I: 3374790-3383213
Chromosome . Primary Identifier  I Chromosome Location . Start  3374790
Chromosome Location . End  3383213 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W05F2.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021036 W05F2.4 W05F2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W05F2.4b W05F2.4b 2532   I: 3375099-3375178

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W05F2.4b.1 3374790 3383213 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon6581   389   I: 3374790-3375178 Caenorhabditis elegans
Exon6592   292   I: 3375248-3375539 Caenorhabditis elegans
Exon6605   102   I: 3375594-3375695 Caenorhabditis elegans
Exon6617   285   I: 3376349-3376633 Caenorhabditis elegans
Exon6628   513   I: 3377648-3378160 Caenorhabditis elegans
Exon6638   528   I: 3378656-3379183 Caenorhabditis elegans
Exon6648   126   I: 3380181-3380306 Caenorhabditis elegans
Exon6658   75   I: 3380362-3380436 Caenorhabditis elegans
Exon6668   91   I: 3381540-3381630 Caenorhabditis elegans
Exon6678   152   I: 3381859-3382010 Caenorhabditis elegans
Exon6688   145   I: 3382793-3382937 Caenorhabditis elegans
Exon6697   143   I: 3383071-3383213 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W05F2.4b.1 3374790 3383213 -1

1 Sequence

Length
2841

1 Sequence Ontology Term

Identifier Name Description
transcript