WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W05F2.4f.1 Sequence Name  W05F2.4f.1
Length (nt)  5907   Chromosome Location  I: 3375099-3402811
Chromosome . Primary Identifier  I Chromosome Location . Start  3375099
Chromosome Location . End  3402811 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W05F2.4f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021036 W05F2.4 W05F2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W05F2.4f W05F2.4f 5907   I: 3375099-3375178

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W05F2.4f.1 3375099 3402811 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

35 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon6585   80   I: 3375099-3375178 Caenorhabditis elegans
Exon6595   292   I: 3375248-3375539 Caenorhabditis elegans
Exon6608   102   I: 3375594-3375695 Caenorhabditis elegans
Exon6620   285   I: 3376349-3376633 Caenorhabditis elegans
Exon6631   513   I: 3377648-3378160 Caenorhabditis elegans
Exon6641   528   I: 3378656-3379183 Caenorhabditis elegans
Exon6651   126   I: 3380181-3380306 Caenorhabditis elegans
Exon6661   75   I: 3380362-3380436 Caenorhabditis elegans
Exon6671   91   I: 3381540-3381630 Caenorhabditis elegans
Exon6681   152   I: 3381859-3382010 Caenorhabditis elegans
Exon6691   145   I: 3382793-3382937 Caenorhabditis elegans
Exon6701   145   I: 3383071-3383215 Caenorhabditis elegans
Exon6710   52   I: 3383956-3384007 Caenorhabditis elegans
Exon6721   218   I: 3387680-3387897 Caenorhabditis elegans
Exon6729   395   I: 3388729-3389123 Caenorhabditis elegans
Exon6737   77   I: 3394670-3394746 Caenorhabditis elegans
Exon6745   246   I: 3394791-3395036 Caenorhabditis elegans
Exon6753   601   I: 3395356-3395956 Caenorhabditis elegans
Exon6761   122   I: 3396666-3396787 Caenorhabditis elegans
Exon6769   69   I: 3396860-3396928 Caenorhabditis elegans
Exon6781   62   I: 3397511-3397572 Caenorhabditis elegans
Exon6789   126   I: 3397766-3397891 Caenorhabditis elegans
Exon6797   82   I: 3397938-3398019 Caenorhabditis elegans
Exon6805   170   I: 3398463-3398632 Caenorhabditis elegans
Exon6813   131   I: 3398685-3398815 Caenorhabditis elegans
Exon6821   158   I: 3398863-3399020 Caenorhabditis elegans
Exon6828   214   I: 3399466-3399679 Caenorhabditis elegans
Exon6837   121   I: 3399724-3399844 Caenorhabditis elegans
Exon6845   108   I: 3400265-3400372 Caenorhabditis elegans
Exon6853   49   I: 3401333-3401381 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W05F2.4f.1 3375099 3402811 -1

1 Sequence

Length
5907

1 Sequence Ontology Term

Identifier Name Description
transcript