WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W05F2.4h.1 Sequence Name  W05F2.4h.1
Length (nt)  5946   Chromosome Location  I: 3375099-3402811
Chromosome . Primary Identifier  I Chromosome Location . Start  3375099
Chromosome Location . End  3402811 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W05F2.4h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021036 W05F2.4 W05F2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W05F2.4h W05F2.4h 5946   I: 3375099-3375178

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W05F2.4h.1 3375099 3402811 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

36 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon6587   80   I: 3375099-3375178 Caenorhabditis elegans
Exon6597   292   I: 3375248-3375539 Caenorhabditis elegans
Exon6610   102   I: 3375594-3375695 Caenorhabditis elegans
Exon6622   285   I: 3376349-3376633 Caenorhabditis elegans
Exon6633   513   I: 3377648-3378160 Caenorhabditis elegans
Exon6643   528   I: 3378656-3379183 Caenorhabditis elegans
Exon6653   126   I: 3380181-3380306 Caenorhabditis elegans
Exon6663   75   I: 3380362-3380436 Caenorhabditis elegans
Exon6673   91   I: 3381540-3381630 Caenorhabditis elegans
Exon6683   152   I: 3381859-3382010 Caenorhabditis elegans
Exon6693   145   I: 3382793-3382937 Caenorhabditis elegans
Exon6703   145   I: 3383071-3383215 Caenorhabditis elegans
Exon6712   52   I: 3383956-3384007 Caenorhabditis elegans
Exon6723   218   I: 3387680-3387897 Caenorhabditis elegans
Exon6731   395   I: 3388729-3389123 Caenorhabditis elegans
Exon6739   77   I: 3394670-3394746 Caenorhabditis elegans
Exon6747   246   I: 3394791-3395036 Caenorhabditis elegans
Exon6755   601   I: 3395356-3395956 Caenorhabditis elegans
Exon6763   86   I: 3396702-3396787 Caenorhabditis elegans
Exon6771   69   I: 3396860-3396928 Caenorhabditis elegans
Exon6777   75   I: 3397376-3397450 Caenorhabditis elegans
Exon6783   62   I: 3397511-3397572 Caenorhabditis elegans
Exon6791   126   I: 3397766-3397891 Caenorhabditis elegans
Exon6799   82   I: 3397938-3398019 Caenorhabditis elegans
Exon6807   170   I: 3398463-3398632 Caenorhabditis elegans
Exon6815   131   I: 3398685-3398815 Caenorhabditis elegans
Exon6823   158   I: 3398863-3399020 Caenorhabditis elegans
Exon6829   214   I: 3399466-3399679 Caenorhabditis elegans
Exon6839   121   I: 3399724-3399844 Caenorhabditis elegans
Exon6847   108   I: 3400265-3400372 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W05F2.4h.1 3375099 3402811 -1

1 Sequence

Length
5946

1 Sequence Ontology Term

Identifier Name Description
transcript