WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W05F2.4j.1 Sequence Name  W05F2.4j.1
Length (nt)  5871   Chromosome Location  I: 3375099-3402811
Chromosome . Primary Identifier  I Chromosome Location . Start  3375099
Chromosome Location . End  3402811 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W05F2.4j.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021036 W05F2.4 W05F2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W05F2.4j W05F2.4j 5871   I: 3375099-3375178

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W05F2.4j.1 3375099 3402811 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

35 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon6589   80   I: 3375099-3375178 Caenorhabditis elegans
Exon6599   292   I: 3375248-3375539 Caenorhabditis elegans
Exon6612   102   I: 3375594-3375695 Caenorhabditis elegans
Exon6624   285   I: 3376349-3376633 Caenorhabditis elegans
Exon6635   513   I: 3377648-3378160 Caenorhabditis elegans
Exon6645   528   I: 3378656-3379183 Caenorhabditis elegans
Exon6655   126   I: 3380181-3380306 Caenorhabditis elegans
Exon6665   75   I: 3380362-3380436 Caenorhabditis elegans
Exon6675   91   I: 3381540-3381630 Caenorhabditis elegans
Exon6685   152   I: 3381859-3382010 Caenorhabditis elegans
Exon6695   145   I: 3382793-3382937 Caenorhabditis elegans
Exon6705   145   I: 3383071-3383215 Caenorhabditis elegans
Exon6714   52   I: 3383956-3384007 Caenorhabditis elegans
Exon6725   218   I: 3387680-3387897 Caenorhabditis elegans
Exon6733   395   I: 3388729-3389123 Caenorhabditis elegans
Exon6741   77   I: 3394670-3394746 Caenorhabditis elegans
Exon6749   246   I: 3394791-3395036 Caenorhabditis elegans
Exon6757   601   I: 3395356-3395956 Caenorhabditis elegans
Exon6765   86   I: 3396702-3396787 Caenorhabditis elegans
Exon6773   69   I: 3396860-3396928 Caenorhabditis elegans
Exon6785   62   I: 3397511-3397572 Caenorhabditis elegans
Exon6793   126   I: 3397766-3397891 Caenorhabditis elegans
Exon6801   82   I: 3397938-3398019 Caenorhabditis elegans
Exon6809   170   I: 3398463-3398632 Caenorhabditis elegans
Exon6817   131   I: 3398685-3398815 Caenorhabditis elegans
Exon6825   158   I: 3398863-3399020 Caenorhabditis elegans
Exon6830   214   I: 3399466-3399679 Caenorhabditis elegans
Exon6841   121   I: 3399724-3399844 Caenorhabditis elegans
Exon6849   108   I: 3400265-3400372 Caenorhabditis elegans
Exon6857   49   I: 3401333-3401381 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W05F2.4j.1 3375099 3402811 -1

1 Sequence

Length
5871

1 Sequence Ontology Term

Identifier Name Description
transcript