WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K03E5.1.1 Sequence Name  K03E5.1.1
Length (nt)  1265   Chromosome Location  I: 3427148-3433207
Chromosome . Primary Identifier  I Chromosome Location . Start  3427148
Chromosome Location . End  3433207 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K03E5.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019360 neto-1 K03E5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K03E5.1 K03E5.1 1107   I: 3427228-3427258

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K03E5.1.1 3427148 3433207 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon6930   111   I: 3427148-3427258 Caenorhabditis elegans
Exon6931   112   I: 3429923-3430034 Caenorhabditis elegans
Exon6932   85   I: 3430084-3430168 Caenorhabditis elegans
Exon6933   57   I: 3430306-3430362 Caenorhabditis elegans
Exon6934   91   I: 3430903-3430993 Caenorhabditis elegans
Exon6935   105   I: 3431043-3431147 Caenorhabditis elegans
Exon6936   235   I: 3431508-3431742 Caenorhabditis elegans
Exon6937   128   I: 3431823-3431950 Caenorhabditis elegans
Exon6938   243   I: 3432816-3433058 Caenorhabditis elegans
Exon6939   98   I: 3433110-3433207 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K03E5.1.1 3427148 3433207 1

1 Sequence

Length
1265

1 Sequence Ontology Term

Identifier Name Description
transcript