WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47G6A.14.2 Sequence Name  Y47G6A.14.2
Length (nt)  1604   Chromosome Location  I: 3462258-3468187
Chromosome . Primary Identifier  I Chromosome Location . Start  3462258
Chromosome Location . End  3468187 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47G6A.14.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021640 Y47G6A.14 Y47G6A.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47G6A.14 Y47G6A.14 1407   I: 3462375-3462494

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y47G6A.14.2 3462258 3468187 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon6974   237   I: 3462258-3462494 Caenorhabditis elegans
Exon6977   93   I: 3462771-3462863 Caenorhabditis elegans
Exon6979   126   I: 3462910-3463035 Caenorhabditis elegans
Exon6981   175   I: 3463666-3463840 Caenorhabditis elegans
Exon6983   122   I: 3464182-3464303 Caenorhabditis elegans
Exon6985   153   I: 3464706-3464858 Caenorhabditis elegans
Exon6987   126   I: 3465373-3465498 Caenorhabditis elegans
Exon6989   99   I: 3465553-3465651 Caenorhabditis elegans
Exon6991   70   I: 3465709-3465778 Caenorhabditis elegans
Exon6993   97   I: 3465824-3465920 Caenorhabditis elegans
Exon6995   46   I: 3465964-3466009 Caenorhabditis elegans
Exon6997   128   I: 3466058-3466185 Caenorhabditis elegans
Exon6998   66   I: 3466237-3466302 Caenorhabditis elegans
Exon7003   66   I: 3468122-3468187 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y47G6A.14.2 3462258 3468187 -1

1 Sequence

Length
1604

1 Sequence Ontology Term

Identifier Name Description
transcript