WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47G6A.14.1 Sequence Name  Y47G6A.14.1
Length (nt)  1528   Chromosome Location  I: 3462270-3466304
Chromosome . Primary Identifier  I Chromosome Location . Start  3462270
Chromosome Location . End  3466304 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47G6A.14.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021640 Y47G6A.14 Y47G6A.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47G6A.14 Y47G6A.14 1407   I: 3462375-3462494

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y47G6A.14.1 3462270 3466304 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon6975   225   I: 3462270-3462494 Caenorhabditis elegans
Exon6976   93   I: 3462771-3462863 Caenorhabditis elegans
Exon6978   126   I: 3462910-3463035 Caenorhabditis elegans
Exon6980   175   I: 3463666-3463840 Caenorhabditis elegans
Exon6982   122   I: 3464182-3464303 Caenorhabditis elegans
Exon6984   153   I: 3464706-3464858 Caenorhabditis elegans
Exon6986   126   I: 3465373-3465498 Caenorhabditis elegans
Exon6988   99   I: 3465553-3465651 Caenorhabditis elegans
Exon6990   70   I: 3465709-3465778 Caenorhabditis elegans
Exon6992   97   I: 3465824-3465920 Caenorhabditis elegans
Exon6994   46   I: 3465964-3466009 Caenorhabditis elegans
Exon6996   128   I: 3466058-3466185 Caenorhabditis elegans
Exon6999   68   I: 3466237-3466304 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y47G6A.14.1 3462270 3466304 -1

1 Sequence

Length
1528

1 Sequence Ontology Term

Identifier Name Description
transcript