WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47G6A.15.1 Sequence Name  Y47G6A.15.1
Length (nt)  956   Chromosome Location  I: 3472965-3476300
Chromosome . Primary Identifier  I Chromosome Location . Start  3472965
Chromosome Location . End  3476300 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47G6A.15.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021641 Y47G6A.15 Y47G6A.15 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47G6A.15 Y47G6A.15 837   I: 3473075-3473194

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y47G6A.15.1 3472965 3476300 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon7009   230   I: 3472965-3473194 Caenorhabditis elegans
Exon7010   510   I: 3473798-3474307 Caenorhabditis elegans
Exon7011   67   I: 3474357-3474423 Caenorhabditis elegans
Exon7012   149   I: 3476152-3476300 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y47G6A.15.1 3472965 3476300 -1

1 Sequence

Length
956

1 Sequence Ontology Term

Identifier Name Description
transcript