WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47G6A.9.1 Sequence Name  Y47G6A.9.1
Length (nt)  1035   Chromosome Location  I: 3479353-3481715
Chromosome . Primary Identifier  I Chromosome Location . Start  3479353
Chromosome Location . End  3481715 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47G6A.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021638 Y47G6A.9 Y47G6A.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47G6A.9 Y47G6A.9 666   I: 3479356-3479487

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y47G6A.9.1 3479353 3481715 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon7015   135   I: 3479353-3479487 Caenorhabditis elegans
Exon7016   184   I: 3480045-3480228 Caenorhabditis elegans
Exon7017   185   I: 3480510-3480694 Caenorhabditis elegans
Exon7018   531   I: 3481185-3481715 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y47G6A.9.1 3479353 3481715 1

1 Sequence

Length
1035

1 Sequence Ontology Term

Identifier Name Description
transcript