WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47G6A.31.1 Sequence Name  Y47G6A.31.1
Length (nt)  754   Chromosome Location  I: 3603338-3604537
Chromosome . Primary Identifier  I Chromosome Location . Start  3603338
Chromosome Location . End  3604537 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47G6A.31.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044436 Y47G6A.31 Y47G6A.31 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47G6A.31 Y47G6A.31 558   I: 3603424-3603466

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y47G6A.31.1 3603338 3604537 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon7358   129   I: 3603338-3603466 Caenorhabditis elegans
Exon7359   211   I: 3603544-3603754 Caenorhabditis elegans
Exon7360   414   I: 3604124-3604537 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y47G6A.31.1 3603338 3604537 1

1 Sequence

Length
754

1 Sequence Ontology Term

Identifier Name Description
transcript