WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y47G6A.25 Sequence Name  Y47G6A.25
Length (nt)  1323   Chromosome Location  I: 3606466-3606732
Chromosome . Primary Identifier  I Chromosome Location . Start  3606466
Chromosome Location . End  3606732
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47G6A.25

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE34403 Y47G6A.25 50.3 440 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00000388
WBRNAi00056815
WBRNAi00004628
WBRNAi00004629
WBRNAi00037191
WBRNAi00083397
WBRNAi00083380
WBRNAi00083412
WBRNAi00087924
WBRNAi00087926
WBRNAi00083421
WBRNAi00086482

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y47G6A.25 3606466 3606732 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021649 Y47G6A.25 Y47G6A.25 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y47G6A.25 3606466 3606732 -1
CDS:Y47G6A.25 3606780 3606865 -1
CDS:Y47G6A.25 3607158 3607443 -1
CDS:Y47G6A.25 3607493 3607750 -1
CDS:Y47G6A.25 3607801 3608108 -1
CDS:Y47G6A.25 3608162 3608279 -1

1 Sequence

Length
1323

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y47G6A.25.1 Y47G6A.25.1 1448   I: 3606407-3608345