WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T28F2.4a Sequence Name  T28F2.4a
Length (nt)  2247   Chromosome Location  I: 3631285-3631655
Chromosome . Primary Identifier  I Chromosome Location . Start  3631285
Chromosome Location . End  3631655
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28F2.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28497 JMJC-1, isoform a 86.0 748 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00054428
WBRNAi00004339
WBRNAi00036094
WBRNAi00116779
WBRNAi00091518

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T28F2.4a 3631285 3631655 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020902 jmjc-1 T28F2.4 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:T28F2.4a 3631285 3631655 -1
CDS:T28F2.4a 3632334 3633030 -1
CDS:T28F2.4a 3633466 3633679 -1
CDS:T28F2.4a 3633728 3634331 -1
CDS:T28F2.4a 3635414 3635671 -1
CDS:T28F2.4a 3636373 3636475 -1

1 Sequence

Length
2247

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T28F2.4a.1 T28F2.4a.1 2449   I: 3631091-3636483