WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28F2.2b.1 Sequence Name  T28F2.2b.1
Length (nt)  700   Chromosome Location  I: 3637353-3638768
Chromosome . Primary Identifier  I Chromosome Location . Start  3637353
Chromosome Location . End  3638768 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28F2.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020901 T28F2.2 T28F2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28F2.2b T28F2.2b 552   I: 3637501-3637503

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T28F2.2b.1 3637353 3638768 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon7430   151   I: 3637353-3637503 Caenorhabditis elegans
Exon7433   75   I: 3637554-3637628 Caenorhabditis elegans
Exon7436   97   I: 3637677-3637773 Caenorhabditis elegans
Exon7439   204   I: 3638299-3638502 Caenorhabditis elegans
Exon7442   111   I: 3638550-3638660 Caenorhabditis elegans
Exon7443   62   I: 3638707-3638768 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T28F2.2b.1 3637353 3638768 1

1 Sequence

Length
700

1 Sequence Ontology Term

Identifier Name Description
transcript