WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28F2.7.1 Sequence Name  T28F2.7.1
Length (nt)  2388   Chromosome Location  I: 3655413-3662183
Chromosome . Primary Identifier  I Chromosome Location . Start  3655413
Chromosome Location . End  3662183 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28F2.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020903 acd-5 T28F2.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28F2.7 T28F2.7 2145   I: 3655632-3655911

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T28F2.7.1 3655413 3662183 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon7472   499   I: 3655413-3655911 Caenorhabditis elegans
Exon7473   324   I: 3655962-3656285 Caenorhabditis elegans
Exon7474   232   I: 3656392-3656623 Caenorhabditis elegans
Exon7475   536   I: 3657720-3658255 Caenorhabditis elegans
Exon7476   184   I: 3658936-3659119 Caenorhabditis elegans
Exon7477   88   I: 3659193-3659280 Caenorhabditis elegans
Exon7478   155   I: 3659924-3660078 Caenorhabditis elegans
Exon7479   155   I: 3660170-3660324 Caenorhabditis elegans
Exon7480   89   I: 3660945-3661033 Caenorhabditis elegans
Exon7481   88   I: 3661809-3661896 Caenorhabditis elegans
Exon7482   38   I: 3662146-3662183 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T28F2.7.1 3655413 3662183 -1

1 Sequence

Length
2388

1 Sequence Ontology Term

Identifier Name Description
transcript