WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1037.5.1 Sequence Name  D1037.5.1
Length (nt)  1717   Chromosome Location  I: 3690145-3694021
Chromosome . Primary Identifier  I Chromosome Location . Start  3690145
Chromosome Location . End  3694021 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1037.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017026 ipla-4 D1037.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1037.5 D1037.5 1674   I: 3690181-3690297

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1037.5.1 3690145 3694021 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon7512   153   I: 3690145-3690297 Caenorhabditis elegans
Exon7513   154   I: 3690354-3690507 Caenorhabditis elegans
Exon7514   74   I: 3690817-3690890 Caenorhabditis elegans
Exon7515   81   I: 3690945-3691025 Caenorhabditis elegans
Exon7516   244   I: 3691225-3691468 Caenorhabditis elegans
Exon7517   322   I: 3691513-3691834 Caenorhabditis elegans
Exon7518   287   I: 3692374-3692660 Caenorhabditis elegans
Exon7519   113   I: 3693044-3693156 Caenorhabditis elegans
Exon7520   72   I: 3693205-3693276 Caenorhabditis elegans
Exon7521   69   I: 3693326-3693394 Caenorhabditis elegans
Exon7522   148   I: 3693874-3694021 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1037.5.1 3690145 3694021 -1

1 Sequence

Length
1717

1 Sequence Ontology Term

Identifier Name Description
transcript