WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y8G1A.1a.1 Sequence Name  Y8G1A.1a.1
Length (nt)  768   Chromosome Location  I: 3745589-3748145
Chromosome . Primary Identifier  I Chromosome Location . Start  3745589
Chromosome Location . End  3748145 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y8G1A.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021175 math-46 Y8G1A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y8G1A.1a Y8G1A.1a 768   I: 3745589-3745811

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y8G1A.1a.1 3745589 3748145 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon7650   223   I: 3745589-3745811 Caenorhabditis elegans
Exon7652   63   I: 3747501-3747563 Caenorhabditis elegans
Exon7654   182   I: 3747610-3747791 Caenorhabditis elegans
Exon7656   300   I: 3747846-3748145 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y8G1A.1a.1 3745589 3748145 1

1 Sequence

Length
768

1 Sequence Ontology Term

Identifier Name Description
transcript