WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK770.1.1 Sequence Name  ZK770.1.1
Length (nt)  2610   Chromosome Location  I: 3769672-3774005
Chromosome . Primary Identifier  I Chromosome Location . Start  3769672
Chromosome Location . End  3774005 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK770.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022815 asic-1 ZK770.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK770.1 ZK770.1 2472   I: 3769681-3769871

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK770.1.1 3769672 3774005 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon7671   200   I: 3769672-3769871 Caenorhabditis elegans
Exon7672   124   I: 3769920-3770043 Caenorhabditis elegans
Exon7673   156   I: 3770092-3770247 Caenorhabditis elegans
Exon7674   177   I: 3770463-3770639 Caenorhabditis elegans
Exon7675   240   I: 3771009-3771248 Caenorhabditis elegans
Exon7676   123   I: 3771527-3771649 Caenorhabditis elegans
Exon7677   119   I: 3771720-3771838 Caenorhabditis elegans
Exon7678   128   I: 3771882-3772009 Caenorhabditis elegans
Exon7679   98   I: 3772065-3772162 Caenorhabditis elegans
Exon7680   158   I: 3772217-3772374 Caenorhabditis elegans
Exon7681   98   I: 3772421-3772518 Caenorhabditis elegans
Exon7682   161   I: 3772561-3772721 Caenorhabditis elegans
Exon7683   211   I: 3772848-3773058 Caenorhabditis elegans
Exon7684   79   I: 3773110-3773188 Caenorhabditis elegans
Exon7685   262   I: 3773278-3773539 Caenorhabditis elegans
Exon7686   276   I: 3773730-3774005 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK770.1.1 3769672 3774005 1

1 Sequence

Length
2610

1 Sequence Ontology Term

Identifier Name Description
transcript