WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53F10.5.1 Sequence Name  F53F10.5.1
Length (nt)  2595   Chromosome Location  I: 3818074-3821496
Chromosome . Primary Identifier  I Chromosome Location . Start  3818074
Chromosome Location . End  3821496 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53F10.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003797 npp-11 F53F10.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53F10.5 F53F10.5 2418   I: 3818079-3818190

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53F10.5.1 3818074 3821496 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon7822   117   I: 3818074-3818190 Caenorhabditis elegans
Exon7823   93   I: 3818238-3818330 Caenorhabditis elegans
Exon7824   1480   I: 3818402-3819881 Caenorhabditis elegans
Exon7825   471   I: 3819932-3820402 Caenorhabditis elegans
Exon7826   188   I: 3821008-3821195 Caenorhabditis elegans
Exon7827   246   I: 3821251-3821496 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53F10.5.1 3818074 3821496 1

1 Sequence

Length
2595

1 Sequence Ontology Term

Identifier Name Description
transcript