WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T03F1.9 Sequence Name  T03F1.9
Length (nt)  2601   Chromosome Location  I: 3862935-3863257
Chromosome . Primary Identifier  I Chromosome Location . Start  3862935
Chromosome Location . End  3863257
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T03F1.9

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE13112 HCP-4 97.4 866 Caenorhabditis elegans
 

Other

19 RNAi

WormBase ID
WBRNAi00063278
WBRNAi00063280
WBRNAi00035098
WBRNAi00084089
WBRNAi00052288
WBRNAi00063276
WBRNAi00070962
WBRNAi00000094
WBRNAi00005000
WBRNAi00005002
WBRNAi00026174
WBRNAi00026175
WBRNAi00062760
WBRNAi00083973
WBRNAi00084073
WBRNAi00084079
WBRNAi00081334
WBRNAi00063277
WBRNAi00117597

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T03F1.9 3862935 3863257 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001832 hcp-4 T03F1.9 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:T03F1.9 3862935 3863257 -1
CDS:T03F1.9 3863308 3863457 -1
CDS:T03F1.9 3863503 3864062 -1
CDS:T03F1.9 3864115 3865100 -1
CDS:T03F1.9 3865153 3865275 -1
CDS:T03F1.9 3865325 3865531 -1
CDS:T03F1.9 3865581 3865787 -1
CDS:T03F1.9 3865893 3865937 -1

1 Sequence

Length
2601

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T03F1.9.1 T03F1.9.1 2704   I: 3862833-3865938