WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T03F1.10.1 Sequence Name  T03F1.10.1
Length (nt)  962   Chromosome Location  I: 3871474-3873402
Chromosome . Primary Identifier  I Chromosome Location . Start  3871474
Chromosome Location . End  3873402 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T03F1.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020191 clec-53 T03F1.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T03F1.10 T03F1.10 927   I: 3871503-3871610

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T03F1.10.1 3871474 3873402 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon7961   137   I: 3871474-3871610 Caenorhabditis elegans
Exon7962   120   I: 3872043-3872162 Caenorhabditis elegans
Exon7963   50   I: 3872207-3872256 Caenorhabditis elegans
Exon7964   106   I: 3872349-3872454 Caenorhabditis elegans
Exon7965   59   I: 3872510-3872568 Caenorhabditis elegans
Exon7966   389   I: 3872613-3873001 Caenorhabditis elegans
Exon7967   101   I: 3873302-3873402 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T03F1.10.1 3871474 3873402 -1

1 Sequence

Length
962

1 Sequence Ontology Term

Identifier Name Description
transcript