WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C50F2.8 Sequence Name  C50F2.8
Length (nt)  1440   Chromosome Location  I: 3901554-3901620
Chromosome . Primary Identifier  I Chromosome Location . Start  3901554
Chromosome Location . End  3901620
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50F2.8

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE34276 MAGU-3 54.2 479 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00042933
WBRNAi00003214
WBRNAi00030038
WBRNAi00117060

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C50F2.8 3901554 3901620 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016841 magu-3 C50F2.8 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:C50F2.8 3901554 3901620 -1
CDS:C50F2.8 3901672 3901785 -1
CDS:C50F2.8 3902257 3902363 -1
CDS:C50F2.8 3902413 3902615 -1
CDS:C50F2.8 3903169 3903487 -1
CDS:C50F2.8 3903576 3903767 -1
CDS:C50F2.8 3904404 3904706 -1
CDS:C50F2.8 3905066 3905200 -1

1 Sequence

Length
1440

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C50F2.8.1 C50F2.8.1 1581   I: 3901421-3905208