WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T20F5.2.1 Sequence Name  T20F5.2.1
Length (nt)  801   Chromosome Location  I: 3908747-3909701
Chromosome . Primary Identifier  I Chromosome Location . Start  3908747
Chromosome Location . End  3909701 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T20F5.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003950 pbs-4 T20F5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T20F5.2 T20F5.2 609   I: 3908752-3908854

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T20F5.2.1 3908747 3909701 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon8039   108   I: 3908747-3908854 Caenorhabditis elegans
Exon8040   296   I: 3908904-3909199 Caenorhabditis elegans
Exon8041   67   I: 3909250-3909316 Caenorhabditis elegans
Exon8042   330   I: 3909372-3909701 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T20F5.2.1 3908747 3909701 1

1 Sequence

Length
801

1 Sequence Ontology Term

Identifier Name Description
transcript