WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T20F5.8.1 Sequence Name  T20F5.8.1
Length (nt)  552   Chromosome Location  I: 3910712-3912482
Chromosome . Primary Identifier  I Chromosome Location . Start  3910712
Chromosome Location . End  3912482 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T20F5.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00077599 T20F5.8 T20F5.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T20F5.8 T20F5.8 459   I: 3910794-3910878

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T20F5.8.1 3910712 3912482 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon8047   167   I: 3910712-3910878 Caenorhabditis elegans
Exon8048   36   I: 3911490-3911525 Caenorhabditis elegans
Exon8049   95   I: 3911569-3911663 Caenorhabditis elegans
Exon8050   254   I: 3912229-3912482 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T20F5.8.1 3910712 3912482 -1

1 Sequence

Length
552

1 Sequence Ontology Term

Identifier Name Description
transcript