WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T20F5.6.1 Sequence Name  T20F5.6.1
Length (nt)  2788   Chromosome Location  I: 3920206-3925162
Chromosome . Primary Identifier  I Chromosome Location . Start  3920206
Chromosome Location . End  3925162 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T20F5.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020628 T20F5.6 T20F5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T20F5.6 T20F5.6 2385   I: 3920570-3920640

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T20F5.6.1 3920206 3925162 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon8064   435   I: 3920206-3920640 Caenorhabditis elegans
Exon8065   1225   I: 3920688-3921912 Caenorhabditis elegans
Exon8066   153   I: 3922456-3922608 Caenorhabditis elegans
Exon8067   213   I: 3922656-3922868 Caenorhabditis elegans
Exon8068   73   I: 3923575-3923647 Caenorhabditis elegans
Exon8069   91   I: 3923698-3923788 Caenorhabditis elegans
Exon8070   189   I: 3923926-3924114 Caenorhabditis elegans
Exon8071   300   I: 3924351-3924650 Caenorhabditis elegans
Exon8072   109   I: 3925054-3925162 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T20F5.6.1 3920206 3925162 -1

1 Sequence

Length
2788

1 Sequence Ontology Term

Identifier Name Description
transcript