WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21E3.1.1 Sequence Name  T21E3.1.1
Length (nt)  2362   Chromosome Location  I: 3932210-3934813
Chromosome . Primary Identifier  I Chromosome Location . Start  3932210
Chromosome Location . End  3934813 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21E3.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020652 egg-4 T21E3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21E3.1 T21E3.1 2262   I: 3932212-3932474

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T21E3.1.1 3932210 3934813 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon8079   265   I: 3932210-3932474 Caenorhabditis elegans
Exon8080   878   I: 3932523-3933400 Caenorhabditis elegans
Exon8081   740   I: 3933449-3934188 Caenorhabditis elegans
Exon8082   290   I: 3934259-3934548 Caenorhabditis elegans
Exon8083   189   I: 3934625-3934813 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T21E3.1.1 3932210 3934813 1

1 Sequence

Length
2362

1 Sequence Ontology Term

Identifier Name Description
transcript