WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21E3.3.1 Sequence Name  T21E3.3.1
Length (nt)  14848   Chromosome Location  I: 3935272-3953991
Chromosome . Primary Identifier  I Chromosome Location . Start  3935272
Chromosome Location . End  3953991 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21E3.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003072 lrp-2 T21E3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21E3.3 T21E3.3 14577   I: 3935494-3935598

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T21E3.3.1 3935272 3953991 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon8084   327   I: 3935272-3935598 Caenorhabditis elegans
Exon8085   145   I: 3935658-3935802 Caenorhabditis elegans
Exon8086   76   I: 3935851-3935926 Caenorhabditis elegans
Exon8087   1231   I: 3936555-3937785 Caenorhabditis elegans
Exon8088   92   I: 3938270-3938361 Caenorhabditis elegans
Exon8089   106   I: 3938405-3938510 Caenorhabditis elegans
Exon8090   3625   I: 3938559-3942183 Caenorhabditis elegans
Exon8091   1300   I: 3942408-3943707 Caenorhabditis elegans
Exon8092   132   I: 3943978-3944109 Caenorhabditis elegans
Exon8093   199   I: 3944157-3944355 Caenorhabditis elegans
Exon8094   132   I: 3944403-3944534 Caenorhabditis elegans
Exon8095   1054   I: 3945001-3946054 Caenorhabditis elegans
Exon8096   272   I: 3946521-3946792 Caenorhabditis elegans
Exon8097   2442   I: 3946842-3949283 Caenorhabditis elegans
Exon8098   2900   I: 3949370-3952269 Caenorhabditis elegans
Exon8099   120   I: 3952337-3952456 Caenorhabditis elegans
Exon8100   276   I: 3952752-3953027 Caenorhabditis elegans
Exon8101   138   I: 3953080-3953217 Caenorhabditis elegans
Exon8102   147   I: 3953300-3953446 Caenorhabditis elegans
Exon8103   134   I: 3953858-3953991 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T21E3.3.1 3935272 3953991 -1

1 Sequence

Length
14848

1 Sequence Ontology Term

Identifier Name Description
transcript