WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28H1.5.1 Sequence Name  F28H1.5.1
Length (nt)  473   Chromosome Location  I: 3978751-3979538
Chromosome . Primary Identifier  I Chromosome Location . Start  3978751
Chromosome Location . End  3979538 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28H1.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017910 F28H1.5 F28H1.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28H1.5 F28H1.5 378   I: 3978832-3978842

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F28H1.5.1 3978751 3979538 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon8159   92   I: 3978751-3978842 Caenorhabditis elegans
Exon8160   232   I: 3979058-3979289 Caenorhabditis elegans
Exon8161   69   I: 3979338-3979406 Caenorhabditis elegans
Exon8162   80   I: 3979459-3979538 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F28H1.5.1 3978751 3979538 -1

1 Sequence

Length
473

1 Sequence Ontology Term

Identifier Name Description
transcript