WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28H1.2.1 Sequence Name  F28H1.2.1
Length (nt)  612   Chromosome Location  I: 3987940-3988699
Chromosome . Primary Identifier  I Chromosome Location . Start  3987940
Chromosome Location . End  3988699 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28H1.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000779 cpn-3 F28H1.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28H1.2 F28H1.2 429   I: 3987978-3988028

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F28H1.2.1 3987940 3988699 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon8175   89   I: 3987940-3988028 Caenorhabditis elegans
Exon8176   137   I: 3988076-3988212 Caenorhabditis elegans
Exon8177   205   I: 3988262-3988466 Caenorhabditis elegans
Exon8178   181   I: 3988519-3988699 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F28H1.2.1 3987940 3988699 1

1 Sequence

Length
612

1 Sequence Ontology Term

Identifier Name Description
transcript