WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55C7.7a.1 Sequence Name  F55C7.7a.1
Length (nt)  7627   Chromosome Location  I: 3999300-4031739
Chromosome . Primary Identifier  I Chromosome Location . Start  3999300
Chromosome Location . End  4031739 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55C7.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006805 unc-73 F55C7.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55C7.7a F55C7.7a 7467   I: 3999348-3999523

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55C7.7a.1 3999300 4031739 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

32 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon8180   224   I: 3999300-3999523 Caenorhabditis elegans
Exon8184   105   I: 3999587-3999691 Caenorhabditis elegans
Exon8188   133   I: 3999776-3999908 Caenorhabditis elegans
Exon8192   62   I: 3999956-4000017 Caenorhabditis elegans
Exon8196   206   I: 4000337-4000542 Caenorhabditis elegans
Exon8200   128   I: 4000676-4000803 Caenorhabditis elegans
Exon8204   72   I: 4001431-4001502 Caenorhabditis elegans
Exon8213   166   I: 4002343-4002508 Caenorhabditis elegans
Exon8218   236   I: 4002597-4002832 Caenorhabditis elegans
Exon8225   258   I: 4002892-4003149 Caenorhabditis elegans
Exon8234   819   I: 4003270-4004088 Caenorhabditis elegans
Exon8243   124   I: 4004481-4004604 Caenorhabditis elegans
Exon8255   79   I: 4010774-4010852 Caenorhabditis elegans
Exon8266   103   I: 4015941-4016043 Caenorhabditis elegans
Exon8273   87   I: 4016885-4016971 Caenorhabditis elegans
Exon8285   522   I: 4021229-4021750 Caenorhabditis elegans
Exon8289   391   I: 4021954-4022344 Caenorhabditis elegans
Exon8293   111   I: 4022391-4022501 Caenorhabditis elegans
Exon8297   248   I: 4022549-4022796 Caenorhabditis elegans
Exon8301   256   I: 4023299-4023554 Caenorhabditis elegans
Exon8305   102   I: 4023650-4023751 Caenorhabditis elegans
Exon8309   1000   I: 4024278-4025277 Caenorhabditis elegans
Exon8313   378   I: 4025460-4025837 Caenorhabditis elegans
Exon8317   241   I: 4025886-4026126 Caenorhabditis elegans
Exon8321   384   I: 4026417-4026800 Caenorhabditis elegans
Exon8325   75   I: 4026867-4026941 Caenorhabditis elegans
Exon8329   211   I: 4026989-4027199 Caenorhabditis elegans
Exon8333   104   I: 4027768-4027871 Caenorhabditis elegans
Exon8337   405   I: 4027999-4028403 Caenorhabditis elegans
Exon8341   94   I: 4028790-4028883 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55C7.7a.1 3999300 4031739 -1

1 Sequence

Length
7627

1 Sequence Ontology Term

Identifier Name Description
transcript