WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55C7.7f.1 Sequence Name  F55C7.7f.1
Length (nt)  2955   Chromosome Location  I: 3999300-4017476
Chromosome . Primary Identifier  I Chromosome Location . Start  3999300
Chromosome Location . End  4017476 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55C7.7f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006805 unc-73 F55C7.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55C7.7f F55C7.7f 2904   I: 3999348-3999523

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55C7.7f.1 3999300 4017476 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon8181   224   I: 3999300-3999523 Caenorhabditis elegans
Exon8186   105   I: 3999587-3999691 Caenorhabditis elegans
Exon8190   133   I: 3999776-3999908 Caenorhabditis elegans
Exon8194   62   I: 3999956-4000017 Caenorhabditis elegans
Exon8198   206   I: 4000337-4000542 Caenorhabditis elegans
Exon8202   128   I: 4000676-4000803 Caenorhabditis elegans
Exon8206   72   I: 4001431-4001502 Caenorhabditis elegans
Exon8215   166   I: 4002343-4002508 Caenorhabditis elegans
Exon8222   236   I: 4002597-4002832 Caenorhabditis elegans
Exon8229   258   I: 4002892-4003149 Caenorhabditis elegans
Exon8238   819   I: 4003270-4004088 Caenorhabditis elegans
Exon8247   124   I: 4004481-4004604 Caenorhabditis elegans
Exon8258   79   I: 4010774-4010852 Caenorhabditis elegans
Exon8269   103   I: 4015941-4016043 Caenorhabditis elegans
Exon8276   87   I: 4016885-4016971 Caenorhabditis elegans
Exon8280   153   I: 4017324-4017476 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55C7.7f.1 3999300 4017476 -1

1 Sequence

Length
2955

1 Sequence Ontology Term

Identifier Name Description
transcript