WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55C7.7c.1 Sequence Name  F55C7.7c.1
Length (nt)  3155   Chromosome Location  I: 3999306-4020617
Chromosome . Primary Identifier  I Chromosome Location . Start  3999306
Chromosome Location . End  4020617 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55C7.7c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006805 unc-73 F55C7.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55C7.7c F55C7.7c 2787   I: 3999348-3999523

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55C7.7c.1 3999306 4020617 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon8182   218   I: 3999306-3999523 Caenorhabditis elegans
Exon8185   105   I: 3999587-3999691 Caenorhabditis elegans
Exon8189   133   I: 3999776-3999908 Caenorhabditis elegans
Exon8193   62   I: 3999956-4000017 Caenorhabditis elegans
Exon8197   206   I: 4000337-4000542 Caenorhabditis elegans
Exon8201   128   I: 4000676-4000803 Caenorhabditis elegans
Exon8205   72   I: 4001431-4001502 Caenorhabditis elegans
Exon8214   166   I: 4002343-4002508 Caenorhabditis elegans
Exon8219   236   I: 4002597-4002832 Caenorhabditis elegans
Exon8226   258   I: 4002892-4003149 Caenorhabditis elegans
Exon8235   819   I: 4003270-4004088 Caenorhabditis elegans
Exon8244   124   I: 4004481-4004604 Caenorhabditis elegans
Exon8256   79   I: 4010774-4010852 Caenorhabditis elegans
Exon8268   103   I: 4015941-4016043 Caenorhabditis elegans
Exon8275   87   I: 4016885-4016971 Caenorhabditis elegans
Exon8283   359   I: 4020259-4020617 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55C7.7c.1 3999306 4020617 -1

1 Sequence

Length
3155

1 Sequence Ontology Term

Identifier Name Description
transcript