WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55C7.7i.1 Sequence Name  F55C7.7i.1
Length (nt)  7361   Chromosome Location  I: 4001612-4031627
Chromosome . Primary Identifier  I Chromosome Location . Start  4001612
Chromosome Location . End  4031627 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55C7.7i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006805 unc-73 F55C7.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55C7.7i F55C7.7i 6423   I: 4002593-4002832

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55C7.7i.1 4001612 4031627 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

25 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon8208   897   I: 4001612-4002508 Caenorhabditis elegans
Exon8217   281   I: 4002552-4002832 Caenorhabditis elegans
Exon8232   258   I: 4002892-4003149 Caenorhabditis elegans
Exon8241   819   I: 4003270-4004088 Caenorhabditis elegans
Exon8250   124   I: 4004481-4004604 Caenorhabditis elegans
Exon8261   79   I: 4010774-4010852 Caenorhabditis elegans
Exon8271   103   I: 4015941-4016043 Caenorhabditis elegans
Exon8278   87   I: 4016885-4016971 Caenorhabditis elegans
Exon8287   522   I: 4021229-4021750 Caenorhabditis elegans
Exon8291   391   I: 4021954-4022344 Caenorhabditis elegans
Exon8295   111   I: 4022391-4022501 Caenorhabditis elegans
Exon8299   248   I: 4022549-4022796 Caenorhabditis elegans
Exon8303   256   I: 4023299-4023554 Caenorhabditis elegans
Exon8307   102   I: 4023650-4023751 Caenorhabditis elegans
Exon8311   1000   I: 4024278-4025277 Caenorhabditis elegans
Exon8315   378   I: 4025460-4025837 Caenorhabditis elegans
Exon8319   241   I: 4025886-4026126 Caenorhabditis elegans
Exon8323   384   I: 4026417-4026800 Caenorhabditis elegans
Exon8327   75   I: 4026867-4026941 Caenorhabditis elegans
Exon8331   211   I: 4026989-4027199 Caenorhabditis elegans
Exon8335   104   I: 4027768-4027871 Caenorhabditis elegans
Exon8339   405   I: 4027999-4028403 Caenorhabditis elegans
Exon8343   94   I: 4028790-4028883 Caenorhabditis elegans
Exon8347   170   I: 4029059-4029228 Caenorhabditis elegans
Exon8350   21   I: 4031607-4031627 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55C7.7i.1 4001612 4031627 -1

1 Sequence

Length
7361

1 Sequence Ontology Term

Identifier Name Description
transcript