WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55C7.7d.1 Sequence Name  F55C7.7d.1
Length (nt)  2519   Chromosome Location  I: 4001618-4008336
Chromosome . Primary Identifier  I Chromosome Location . Start  4001618
Chromosome Location . End  4008336 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55C7.7d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006805 unc-73 F55C7.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55C7.7d F55C7.7d 1659   I: 4002331-4002508

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55C7.7d.1 4001618 4008336 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon8210   891   I: 4001618-4002508 Caenorhabditis elegans
Exon8220   236   I: 4002597-4002832 Caenorhabditis elegans
Exon8227   258   I: 4002892-4003149 Caenorhabditis elegans
Exon8236   819   I: 4003270-4004088 Caenorhabditis elegans
Exon8245   124   I: 4004481-4004604 Caenorhabditis elegans
Exon8254   191   I: 4008146-4008336 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55C7.7d.1 4001618 4008336 -1

1 Sequence

Length
2519

1 Sequence Ontology Term

Identifier Name Description
transcript