WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00219973 Gene Name  F55C7.9
Sequence Name  ? F55C7.9 Organism  Caenorhabditis elegans
Automated Description  Is affected by daf-2 based on microarray studies. Biotype  SO:0001263
Genetic Position  Length (nt)  ? 83
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00219973

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F55C7.9 F55C7.9 83   I: 4017386-4017468
 

Other

0 CDSs

4 RNAi Result

WormBase ID
WBRNAi00107807
WBRNAi00107808
WBRNAi00107789
WBRNAi00032869

4 Allele

Public Name
gk962706
gk963902
gk964159
gk730627

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00219973 4017386 4017468 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

0 Downstream Intergenic Region

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in daf-2(e1370) comparing to in N2. Student's t-test, fold change > 2, p-value < 0.05. WBPaper00055386:daf-2(e1370)_upregulated
  Developmentally modulated gene cluster. self-organizing map cgc4386_cluster_6_5

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00219973 4017386 4017468 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
83

1 Sequence Ontology Term