WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09D1.1o.1 Sequence Name  C09D1.1o.1
Length (nt)  17739   Chromosome Location  I: 4035893-4078127
Chromosome . Primary Identifier  I Chromosome Location . Start  4035893
Chromosome Location . End  4078127 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09D1.1o.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006820 unc-89 C09D1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09D1.1o C09D1.1o 17739   I: 4035893-4035942

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09D1.1o.1 4035893 4078127 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

33 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon8356   50   I: 4035893-4035942 Caenorhabditis elegans
Exon8370   274   I: 4036629-4036902 Caenorhabditis elegans
Exon8379   137   I: 4036947-4037083 Caenorhabditis elegans
Exon8388   171   I: 4038490-4038660 Caenorhabditis elegans
Exon8397   163   I: 4038710-4038872 Caenorhabditis elegans
Exon8408   182   I: 4044800-4044981 Caenorhabditis elegans
Exon8417   79   I: 4045025-4045103 Caenorhabditis elegans
Exon8426   221   I: 4045496-4045716 Caenorhabditis elegans
Exon8435   83   I: 4046020-4046102 Caenorhabditis elegans
Exon8449   138   I: 4047250-4047387 Caenorhabditis elegans
Exon8462   111   I: 4047965-4048075 Caenorhabditis elegans
Exon8476   227   I: 4048124-4048350 Caenorhabditis elegans
Exon8490   744   I: 4048906-4049649 Caenorhabditis elegans
Exon8504   69   I: 4049972-4050040 Caenorhabditis elegans
Exon8518   216   I: 4050093-4050308 Caenorhabditis elegans
Exon8532   188   I: 4051955-4052142 Caenorhabditis elegans
Exon8546   484   I: 4052456-4052939 Caenorhabditis elegans
Exon8560   186   I: 4053398-4053583 Caenorhabditis elegans
Exon8568   66   I: 4054476-4054541 Caenorhabditis elegans
Exon8579   1854   I: 4055391-4057244 Caenorhabditis elegans
Exon8594   357   I: 4058536-4058892 Caenorhabditis elegans
Exon8608   1232   I: 4058979-4060210 Caenorhabditis elegans
Exon8622   1861   I: 4060266-4062126 Caenorhabditis elegans
Exon8636   157   I: 4062304-4062460 Caenorhabditis elegans
Exon8661   6065   I: 4064920-4070984 Caenorhabditis elegans
Exon8675   244   I: 4071035-4071278 Caenorhabditis elegans
Exon8689   330   I: 4071333-4071662 Caenorhabditis elegans
Exon8707   104   I: 4073538-4073641 Caenorhabditis elegans
Exon8721   275   I: 4075253-4075527 Caenorhabditis elegans
Exon8735   1085   I: 4075626-4076710 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09D1.1o.1 4035893 4078127 1

1 Sequence

Length
17739

1 Sequence Ontology Term

Identifier Name Description
transcript