WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09D1.1b.1 Sequence Name  C09D1.1b.1
Length (nt)  24703   Chromosome Location  I: 4035893-4090884
Chromosome . Primary Identifier  I Chromosome Location . Start  4035893
Chromosome Location . End  4090884 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09D1.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006820 unc-89 C09D1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09D1.1b C09D1.1b 24246   I: 4035893-4035942

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09D1.1b.1 4035893 4090884 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

48 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon8361   50   I: 4035893-4035942 Caenorhabditis elegans
Exon8363   274   I: 4036629-4036902 Caenorhabditis elegans
Exon8372   137   I: 4036947-4037083 Caenorhabditis elegans
Exon8381   171   I: 4038490-4038660 Caenorhabditis elegans
Exon8390   163   I: 4038710-4038872 Caenorhabditis elegans
Exon8401   182   I: 4044800-4044981 Caenorhabditis elegans
Exon8410   79   I: 4045025-4045103 Caenorhabditis elegans
Exon8419   221   I: 4045496-4045716 Caenorhabditis elegans
Exon8428   83   I: 4046020-4046102 Caenorhabditis elegans
Exon8442   138   I: 4047250-4047387 Caenorhabditis elegans
Exon8451   111   I: 4047965-4048075 Caenorhabditis elegans
Exon8465   227   I: 4048124-4048350 Caenorhabditis elegans
Exon8479   744   I: 4048906-4049649 Caenorhabditis elegans
Exon8493   69   I: 4049972-4050040 Caenorhabditis elegans
Exon8507   216   I: 4050093-4050308 Caenorhabditis elegans
Exon8521   188   I: 4051955-4052142 Caenorhabditis elegans
Exon8535   484   I: 4052456-4052939 Caenorhabditis elegans
Exon8549   186   I: 4053398-4053583 Caenorhabditis elegans
Exon8563   66   I: 4054476-4054541 Caenorhabditis elegans
Exon8571   1854   I: 4055391-4057244 Caenorhabditis elegans
Exon8583   357   I: 4058536-4058892 Caenorhabditis elegans
Exon8597   1232   I: 4058979-4060210 Caenorhabditis elegans
Exon8613   1861   I: 4060266-4062126 Caenorhabditis elegans
Exon8625   157   I: 4062304-4062460 Caenorhabditis elegans
Exon8639   2160   I: 4062675-4064834 Caenorhabditis elegans
Exon8650   6065   I: 4064920-4070984 Caenorhabditis elegans
Exon8664   244   I: 4071035-4071278 Caenorhabditis elegans
Exon8678   330   I: 4071333-4071662 Caenorhabditis elegans
Exon8696   104   I: 4073538-4073641 Caenorhabditis elegans
Exon8710   275   I: 4075253-4075527 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09D1.1b.1 4035893 4090884 1

1 Sequence

Length
24703

1 Sequence Ontology Term

Identifier Name Description
transcript