WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09D1.1g.1 Sequence Name  C09D1.1g.1
Length (nt)  22827   Chromosome Location  I: 4047136-4090427
Chromosome . Primary Identifier  I Chromosome Location . Start  4047136
Chromosome Location . End  4090427 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09D1.1g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006820 unc-89 C09D1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09D1.1g C09D1.1g 22827   I: 4047136-4047214

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09D1.1g.1 4047136 4090427 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

39 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon8436   79   I: 4047136-4047214 Caenorhabditis elegans
Exon8454   111   I: 4047965-4048075 Caenorhabditis elegans
Exon8468   227   I: 4048124-4048350 Caenorhabditis elegans
Exon8482   744   I: 4048906-4049649 Caenorhabditis elegans
Exon8496   69   I: 4049972-4050040 Caenorhabditis elegans
Exon8510   216   I: 4050093-4050308 Caenorhabditis elegans
Exon8524   188   I: 4051955-4052142 Caenorhabditis elegans
Exon8538   484   I: 4052456-4052939 Caenorhabditis elegans
Exon8552   186   I: 4053398-4053583 Caenorhabditis elegans
Exon8564   66   I: 4054476-4054541 Caenorhabditis elegans
Exon8572   1854   I: 4055391-4057244 Caenorhabditis elegans
Exon8586   357   I: 4058536-4058892 Caenorhabditis elegans
Exon8600   1232   I: 4058979-4060210 Caenorhabditis elegans
Exon8616   1861   I: 4060266-4062126 Caenorhabditis elegans
Exon8628   157   I: 4062304-4062460 Caenorhabditis elegans
Exon8642   2160   I: 4062675-4064834 Caenorhabditis elegans
Exon8653   6065   I: 4064920-4070984 Caenorhabditis elegans
Exon8667   244   I: 4071035-4071278 Caenorhabditis elegans
Exon8681   330   I: 4071333-4071662 Caenorhabditis elegans
Exon8699   104   I: 4073538-4073641 Caenorhabditis elegans
Exon8713   275   I: 4075253-4075527 Caenorhabditis elegans
Exon8727   1085   I: 4075626-4076710 Caenorhabditis elegans
Exon8741   113   I: 4077177-4077289 Caenorhabditis elegans
Exon8755   169   I: 4077395-4077563 Caenorhabditis elegans
Exon8767   100   I: 4078024-4078123 Caenorhabditis elegans
Exon8782   192   I: 4079525-4079716 Caenorhabditis elegans
Exon8796   357   I: 4081936-4082292 Caenorhabditis elegans
Exon8808   265   I: 4082402-4082666 Caenorhabditis elegans
Exon8820   287   I: 4083014-4083300 Caenorhabditis elegans
Exon8832   122   I: 4083824-4083945 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09D1.1g.1 4047136 4090427 1

1 Sequence

Length
22827

1 Sequence Ontology Term

Identifier Name Description
transcript