WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09D1.1i.1 Sequence Name  C09D1.1i.1
Length (nt)  22761   Chromosome Location  I: 4047136-4090427
Chromosome . Primary Identifier  I Chromosome Location . Start  4047136
Chromosome Location . End  4090427 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09D1.1i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006820 unc-89 C09D1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09D1.1i C09D1.1i 22761   I: 4047136-4047214

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09D1.1i.1 4047136 4090427 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

38 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon8438   79   I: 4047136-4047214 Caenorhabditis elegans
Exon8456   111   I: 4047965-4048075 Caenorhabditis elegans
Exon8470   227   I: 4048124-4048350 Caenorhabditis elegans
Exon8484   744   I: 4048906-4049649 Caenorhabditis elegans
Exon8498   69   I: 4049972-4050040 Caenorhabditis elegans
Exon8512   216   I: 4050093-4050308 Caenorhabditis elegans
Exon8526   188   I: 4051955-4052142 Caenorhabditis elegans
Exon8540   484   I: 4052456-4052939 Caenorhabditis elegans
Exon8554   186   I: 4053398-4053583 Caenorhabditis elegans
Exon8574   1854   I: 4055391-4057244 Caenorhabditis elegans
Exon8588   357   I: 4058536-4058892 Caenorhabditis elegans
Exon8602   1232   I: 4058979-4060210 Caenorhabditis elegans
Exon8617   1861   I: 4060266-4062126 Caenorhabditis elegans
Exon8630   157   I: 4062304-4062460 Caenorhabditis elegans
Exon8644   2160   I: 4062675-4064834 Caenorhabditis elegans
Exon8655   6065   I: 4064920-4070984 Caenorhabditis elegans
Exon8669   244   I: 4071035-4071278 Caenorhabditis elegans
Exon8683   330   I: 4071333-4071662 Caenorhabditis elegans
Exon8701   104   I: 4073538-4073641 Caenorhabditis elegans
Exon8715   275   I: 4075253-4075527 Caenorhabditis elegans
Exon8729   1085   I: 4075626-4076710 Caenorhabditis elegans
Exon8743   113   I: 4077177-4077289 Caenorhabditis elegans
Exon8757   169   I: 4077395-4077563 Caenorhabditis elegans
Exon8769   100   I: 4078024-4078123 Caenorhabditis elegans
Exon8784   192   I: 4079525-4079716 Caenorhabditis elegans
Exon8798   357   I: 4081936-4082292 Caenorhabditis elegans
Exon8810   265   I: 4082402-4082666 Caenorhabditis elegans
Exon8822   287   I: 4083014-4083300 Caenorhabditis elegans
Exon8834   122   I: 4083824-4083945 Caenorhabditis elegans
Exon8846   404   I: 4084065-4084468 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09D1.1i.1 4047136 4090427 1

1 Sequence

Length
22761

1 Sequence Ontology Term

Identifier Name Description
transcript