WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09D1.1c.1 Sequence Name  C09D1.1c.1
Length (nt)  4734   Chromosome Location  I: 4081507-4090884
Chromosome . Primary Identifier  I Chromosome Location . Start  4081507
Chromosome Location . End  4090884 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09D1.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006820 unc-89 C09D1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09D1.1c C09D1.1c 4182   I: 4081602-4081624

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09D1.1c.1 4081507 4090884 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon8791   118   I: 4081507-4081624 Caenorhabditis elegans
Exon8793   357   I: 4081936-4082292 Caenorhabditis elegans
Exon8805   265   I: 4082402-4082666 Caenorhabditis elegans
Exon8817   287   I: 4083014-4083300 Caenorhabditis elegans
Exon8829   122   I: 4083824-4083945 Caenorhabditis elegans
Exon8841   404   I: 4084065-4084468 Caenorhabditis elegans
Exon8853   201   I: 4085025-4085225 Caenorhabditis elegans
Exon8865   528   I: 4086656-4087183 Caenorhabditis elegans
Exon8877   322   I: 4087457-4087778 Caenorhabditis elegans
Exon8889   785   I: 4088154-4088938 Caenorhabditis elegans
Exon8901   329   I: 4089295-4089623 Caenorhabditis elegans
Exon8913   219   I: 4089682-4089900 Caenorhabditis elegans
Exon8925   240   I: 4089947-4090186 Caenorhabditis elegans
Exon8946   557   I: 4090328-4090884 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09D1.1c.1 4081507 4090884 1

1 Sequence

Length
4734

1 Sequence Ontology Term

Identifier Name Description
transcript