WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R12E2.8.1 Sequence Name  R12E2.8.1
Length (nt)  798   Chromosome Location  I: 4155542-4158718
Chromosome . Primary Identifier  I Chromosome Location . Start  4155542
Chromosome Location . End  4158718 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R12E2.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020034 R12E2.8 R12E2.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R12E2.8 R12E2.8 726   I: 4155594-4155671

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R12E2.8.1 4155542 4158718 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon9093   130   I: 4155542-4155671 Caenorhabditis elegans
Exon9094   247   I: 4155755-4156001 Caenorhabditis elegans
Exon9095   92   I: 4157511-4157602 Caenorhabditis elegans
Exon9096   71   I: 4158114-4158184 Caenorhabditis elegans
Exon9097   156   I: 4158256-4158411 Caenorhabditis elegans
Exon9098   102   I: 4158617-4158718 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R12E2.8.1 4155542 4158718 -1

1 Sequence

Length
798

1 Sequence Ontology Term

Identifier Name Description
transcript