WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R12E2.4a.1 Sequence Name  R12E2.4a.1
Length (nt)  1183   Chromosome Location  I: 4165135-4167056
Chromosome . Primary Identifier  I Chromosome Location . Start  4165135
Chromosome Location . End  4167056 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R12E2.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002139 inx-17 R12E2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R12E2.4a R12E2.4a 1089   I: 4165135-4165202

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R12E2.4a.1 4165135 4167056 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon9116   68   I: 4165135-4165202 Caenorhabditis elegans
Exon9117   232   I: 4165321-4165552 Caenorhabditis elegans
Exon9119   211   I: 4165597-4165807 Caenorhabditis elegans
Exon9121   263   I: 4165866-4166128 Caenorhabditis elegans
Exon9123   409   I: 4166648-4167056 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R12E2.4a.1 4165135 4167056 1

1 Sequence

Length
1183

1 Sequence Ontology Term

Identifier Name Description
transcript