WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R12E2.10.1 Sequence Name  R12E2.10.1
Length (nt)  2364   Chromosome Location  I: 4168984-4171589
Chromosome . Primary Identifier  I Chromosome Location . Start  4168984
Chromosome Location . End  4171589 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R12E2.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020035 egg-5 R12E2.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R12E2.10 R12E2.10 2262   I: 4169084-4169174

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R12E2.10.1 4168984 4171589 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon9124   191   I: 4168984-4169174 Caenorhabditis elegans
Exon9125   290   I: 4169251-4169540 Caenorhabditis elegans
Exon9126   740   I: 4169611-4170350 Caenorhabditis elegans
Exon9127   878   I: 4170399-4171276 Caenorhabditis elegans
Exon9128   265   I: 4171325-4171589 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R12E2.10.1 4168984 4171589 -1

1 Sequence

Length
2364

1 Sequence Ontology Term

Identifier Name Description
transcript