WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00197595 Gene Name  R12E2.18
Sequence Name  ? R12E2.18 Organism  Caenorhabditis elegans
Automated Description  Is affected by multi-walled carbon nanotube based on RNA-seq studies. Biotype  SO:0001263
Genetic Position  Length (nt)  ? 103
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00197595

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R12E2.18 R12E2.18 103   I: 4172204-4172306
 

Other

0 CDSs

0 RNAi Result

4 Allele

Public Name
gk962706
gk963902
gk964159
gk108737

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00197595 4172204 4172306 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrI_4171590..4172203   614 I: 4171590-4172203 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Genes that showed significantly increased expression after exposure to 1mg/L MWCNTs from L1 larva to young adult. Transcripts with false discovery rate-corrected p-values < 0.05 and fold change > 2 were defined as differentially expressed. WBPaper00049377:MWCNT_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00197595 4172204 4172306 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
103

1 Sequence Ontology Term