WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R12E2.12.1 Sequence Name  R12E2.12.1
Length (nt)  737   Chromosome Location  I: 4173758-4174774
Chromosome . Primary Identifier  I Chromosome Location . Start  4173758
Chromosome Location . End  4174774 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R12E2.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020037 mrps-6 R12E2.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R12E2.12 R12E2.12 489   I: 4173971-4174189

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R12E2.12.1 4173758 4174774 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon9134   432   I: 4173758-4174189 Caenorhabditis elegans
Exon9135   79   I: 4174358-4174436 Caenorhabditis elegans
Exon9136   146   I: 4174486-4174631 Caenorhabditis elegans
Exon9137   80   I: 4174695-4174774 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R12E2.12.1 4173758 4174774 -1

1 Sequence

Length
737

1 Sequence Ontology Term

Identifier Name Description
transcript