WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R12E2.13.1 Sequence Name  R12E2.13.1
Length (nt)  746   Chromosome Location  I: 4177305-4178447
Chromosome . Primary Identifier  I Chromosome Location . Start  4177305
Chromosome Location . End  4178447 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R12E2.13.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020038 R12E2.13 R12E2.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R12E2.13 R12E2.13 621   I: 4177418-4177591

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R12E2.13.1 4177305 4178447 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon9147   287   I: 4177305-4177591 Caenorhabditis elegans
Exon9148   90   I: 4177655-4177744 Caenorhabditis elegans
Exon9149   128   I: 4177794-4177921 Caenorhabditis elegans
Exon9150   104   I: 4178031-4178134 Caenorhabditis elegans
Exon9151   137   I: 4178311-4178447 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R12E2.13.1 4177305 4178447 -1

1 Sequence

Length
746

1 Sequence Ontology Term

Identifier Name Description
transcript